RNA-Seq to Enrichment Map

Preview

Perform a pair-wise comparison of gene expression data then visualize the list of altered pathways. You will use RNA sequencing data that arises from two conditions (sample data is provided). This raw data will be converted into a single gene list where genes are assigned a rank according to differential expression. Pathways enriched in this list are identified and displayed as an visual map which organizes pathways by overarching themes.

• 1

  Process Data

  Derive a list of differentially expressed genes from RNA sequencing data

• 2

  Identify Pathways

  Identify enriched pathways using Gene Set Enrichment Analysis

• 3

  Visualize

  Create an Enrichment Map displaying the landscape of pathways